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1. OmicsML/CellPLM OmicsML/CellPLM Public

   Official repo for CellPLM: Pre-training of Cell Language Model Beyond Single Cells.

   Jupyter Notebook 101 14

2. Project-N-E-K-O/N.E.K.O Project-N-E-K-O/N.E.K.O Public

   N.E.K.O. — A proactive, multi-modal AI companion featuring 24/7 ambient awareness, agent capability and an embodied emotional engine.

   Python 740 100

3. simular-ai/Agent-S simular-ai/Agent-S Public

   Agent S: an open agentic framework that uses computers like a human

   Python 10.1k 1.2k

4. OmicsML/dance OmicsML/dance Public

   DANCE: a deep learning library and benchmark platform for single-cell analysis

   Python 384 36

5. awesome-graph-transformer awesome-graph-transformer Public

   Papers about graph transformers.

   920 75

6. OmicsML/awesome-deep-learning-single-cell-papers OmicsML/awesome-deep-learning-single-cell-papers Public

   842 113