Issues

• Multipe tables as input - sample_table

  pepkit/peppy#508 · Filter by author KuechlerO opened on Nov 24, 2025
  2

• Repeated message should be shown once

  likely-solved
  pepkit/peppy#499 · Filter by author nsheff opened on Jul 22, 2025
  

• Confusing error message

  likely-solved
  pepkit/peppy#498 · Filter by author nsheff opened on Mar 11, 2025
  

• Duplicate info message

  pepkit/peppy#497 · Filter by author nsheff opened on Mar 11, 2025

• peppy 0.40.6 and 0.40.7 lead to eido validation error

  pepkit/peppy#496 · Filter by author johanneskoester opened on Oct 7, 2024
  2

• Merge Eido into Peppy

  likely-solved
  pepkit/peppy#492 · Filter by author donaldcampbelljr opened on Sep 4, 2024
  

• Should Peppy infer a project name from a csv PEP? If so, from where?

  question
  pepkit/peppy#482 · Filter by author donaldcampbelljr opened on Mar 20, 2024

• Should appending sample modifiers override column values in sample.csv?

  question
  pepkit/peppy#481 · Filter by author donaldcampbelljr opened on Mar 7, 2024
  1

• Using v0.40.0 can create peppy project without sample names.

  help wanted
  pepkit/peppy#473 · Filter by author donaldcampbelljr opened on Jan 17, 2024 · v0.41.0
  1

  

• restructure peppy constructor function (init)

  enhancement - devsenhancement - userspriority-highrefactor
  pepkit/peppy#465 · Filter by author khoroshevskyi opened on Dec 6, 2023 · v0.50.0
  4

• should pephubclient become part of peppy to simplify things?

  enhancement - usersrefactor
  pepkit/peppy#462 · Filter by author donaldcampbelljr opened on Dec 5, 2023 · v0.50.0
  2

• Duplicated error message upon project load

  messaging
  pepkit/peppy#483 · Filter by author nsheff opened on Aug 14, 2023 · v0.41.0
  5

  

• Performance idea: generator for object-style representation

  enhancement - devsenhancement - userspriority-low
  pepkit/peppy#432 · Filter by author nsheff opened on Feb 7, 2023 · v0.50.0
  3

• Sample order is not preserved for merged samples

  pepkit/peppy#375 · Filter by author nsheff opened on Feb 9, 2022

• Lump warnings of "Not all environment variables were populated in derived attribute source"

  enhancement - userspriority-low
  pepkit/peppy#364 · Filter by author nsheff opened on Mar 21, 2021

• specifying sample names columns in project config

  brainstormingenhancement - users
  pepkit/peppy#360 · Filter by author nsheff opened on Dec 10, 2020

• sample modifier: rename

  brainstorming
  pepkit/peppy#359 · Filter by author nsheff opened on Nov 3, 2020

• Referencing python package files as paths in PEP

  brainstormingenhancement - users
  pepkit/peppy#350 · Filter by author afrendeiro opened on May 27, 2020
  5

• implement project_modifiers.imply

  brainstorming
  pepkit/peppy#342 · Filter by author stolarczyk opened on Apr 8, 2020
  2

• new idea: sample_filters

  enhancement - userspriority-low
  pepkit/peppy#338 · Filter by author nsheff opened on Mar 4, 2020
  3

• unstructured sample data

  brainstorming
  pepkit/peppy#333 · Filter by author nsheff opened on Nov 22, 2019

• error helps for derived columns

  enhancement - users
  pepkit/peppy#335 · Filter by author nsheff opened on Jul 19, 2019
  2

  

• Stop making subprojects mutate instances

  enhancement - devsenhancement - users
  pepkit/peppy#310 · Filter by author vreuter opened on May 26, 2019 · v0.41.0
  3

• document and advertise url sample sheets

  docs
  pepkit/peppy#307 · Filter by author nsheff opened on May 8, 2019
  1

  

• Project show for extra-detailed repr

  enhancement - devsenhancement - users
  pepkit/peppy#295 · Filter by author vreuter opened on Apr 30, 2019 · v0.41.0
  3