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Sync Barcodes

This repository contains Arduino code (arduino-barcodes) for generating TTL barcodes that can be used to synchronize various data sources.

First, the output pin of the Arduino must be connected to a digital input line of all devices with independent clocks. Once acquisition is finished, the unique 32-bit barcodes can be used to align the data offline, even if one of the data streams is interrupted during the experiment.

barcodes.py provides an example of how to extract the barcode values from an array of on/off events.

Alternative implementation

For a better documented, more rigorously validated version of the sync barcodes concept, check out the DAQ Synchronization Project from the Optogenetics and Neural Engineering Core at the University of Colorado Denver.

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Digital barcodes for synchronizing data streams with different hardware clocks

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