Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Search
/
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
nf-core
rnaseq
Repository navigation
Code
Issues
23
(23)
Pull requests
5
(5)
Actions
Security and quality
Insights
More
items
Actions: nf-core/rnaseq
Actions
All workflows
Workflows
Close user-tagged issues and PRs
Close user-tagged issues and PRs
Copilot
Copilot
Copilot code review
Copilot code review
Copilot coding agent
Copilot coding agent
Fix linting from a comment
Fix linting from a comment
full-sized tests on cloud providers
full-sized tests on cloud providers
Nextflow strict syntax lint
Nextflow strict syntax lint
nf-core AWS full size tests
nf-core AWS full size tests
nf-core AWS test
nf-core AWS test
nf-core branch protection
nf-core branch protection
Show more workflows...
Management
Caches
All workflows
All workflows
Actions
Loading...
Loading
Sorry, something went wrong.
Uh oh!
There was an error while loading.
Please reload this page
.
will be ignored since log searching is not yet available
Showing runs from all workflows
will be ignored since log searching is not yet available
2,500+ workflow runs
2,500+ workflow runs
Workflow
Filter by Workflow
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching workflows.
Event
Filter by Event
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching events.
Status
Filter by Status
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching statuses.
Branch
Filter by Branch
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching branches.
Actor
Filter by Actor
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching users.
Take the input samplesheet as a validated row channel for pipeline composition
Fix linting from a comment
#1541:
Issue comment
#1966 (comment)
created by
pinin4fjords
2s
2s
View workflow file
Take the input samplesheet as a validated row channel for pipeline composition
Fix linting from a comment
#1540:
Issue comment
#1966 (comment)
created by
bentsherman
2s
2s
View workflow file
Merge pull request #1974 from nf-core/patch
Nextflow strict syntax lint
#1511:
Commit
b987a54
pushed by
mashehu
25s
master
master
25s
View workflow file
Post PR comment
Post PR comment
#3031:
completed by
mashehu
16s
16s
View workflow file
Post PR comment
Post PR comment
#3030:
completed by
mashehu
9s
9s
View workflow file
Post PR comment
Post PR comment
#3029:
in_progress by
mashehu
8s
8s
View workflow file
Post PR comment
Post PR comment
#3028:
in_progress by
mashehu
17s
17s
View workflow file
Post PR comment
Post PR comment
#3027:
completed by
mashehu
19s
19s
View workflow file
Post PR comment
Post PR comment
#3026:
in_progress by
mashehu
17s
17s
View workflow file
Post PR comment
Post PR comment
#3025:
completed by
mashehu
16s
16s
View workflow file
Post PR comment
Post PR comment
#3024:
in_progress by
mashehu
14s
14s
View workflow file
Post PR comment
Post PR comment
#3023:
in_progress by
mashehu
15s
15s
View workflow file
Post PR comment
Post PR comment
#3022:
requested by
mashehu
13s
13s
View workflow file
Post PR comment
Post PR comment
#3021:
requested by
mashehu
11s
11s
View workflow file
Post PR comment
Post PR comment
#3019:
requested by
mashehu
12s
12s
View workflow file
Post PR comment
Post PR comment
#3020:
requested by
mashehu
12s
12s
View workflow file
Switch fix-linting to the hardened nf-core/actions reusable workflow
Run GPU nf-tests
#1308:
Pull request
#1974
opened by
mashehu
1m 12s
patch
patch
1m 12s
View #1974
View workflow file
Switch fix-linting to the hardened nf-core/actions reusable workflow
nf-core branch protection
#420:
Pull request
#1974
opened by
mashehu
7s
patch
patch
7s
View #1974
View workflow file
Switch fix-linting to the hardened nf-core/actions reusable workflow
Run nf-test on ARM
#1529:
Pull request
#1974
opened by
mashehu
1m 3s
patch
patch
1m 3s
View #1974
View workflow file
Switch fix-linting to the hardened nf-core/actions reusable workflow
Run nf-test
#1962:
Pull request
#1974
opened by
mashehu
1m 8s
patch
patch
1m 8s
View #1974
View workflow file
Switch fix-linting to the hardened nf-core/actions reusable workflow
Nextflow strict syntax lint
#1510:
Pull request
#1974
opened by
mashehu
34s
patch
patch
34s
View #1974
View workflow file
Switch fix-linting to the hardened nf-core/actions reusable workflow
Test successful pipeline download with 'nf-core pipelines download'
#281:
Pull request
#1974
opened by
mashehu
13m 28s
patch
patch
13m 28s
View #1974
View workflow file
Switch fix-linting to the hardened nf-core/actions reusable workflow
nf-core template version comment
#2017:
Pull request
#1974
opened by
mashehu
38s
patch
patch
38s
View #1974
View workflow file
Switch fix-linting to the hardened nf-core/actions reusable workflow
nf-core linting
#5716:
Pull request
#1974
opened by
mashehu
2m 52s
patch
patch
2m 52s
View #1974
View workflow file
Post PR comment
Post PR comment
#3018:
completed by
pinin4fjords
12s
12s
View workflow file
Previous
1
2
3
4
5
…
99
100
101
Next
You can’t perform that action at this time.