BioImageOperation-B

BioImageOperation-B (BIO-B) is a toolkit for behavioural analysis

Quick guide

• From BIO-B location, run from command line:

pip install -r requirements.txt

Running the pipeline

• Define desired parameters in .yml file (see example in /resources)
• From BIO-B location, run python script:

python run.py --params path/to/params.yml

For support and discussion, please use the Image.sc forum and post to the forum with the tag 'BioImageOperation'.