Issues

• Adopt log crate for library-friendly logging

  enhancement
  databio/gtars#225 · Filter by author nsheff opened on Jan 21, 2026

• Implement tss dist calculation for Genomdist crate

  databio/gtars#222 · Filter by author khoroshevskyi opened on Jan 15, 2026

• instructions for building python bindings are gone

  databio/gtars#216 · Filter by author nsheff opened on Dec 5, 2025
  2

• install instructions is broken

  documentation
  databio/gtars#215 · Filter by author nsheff opened on Dec 5, 2025
  1

• In bbcache switch from reqwest to ureq

  likely solved
  databio/gtars#213 · Filter by author nsheff opened on Dec 5, 2025
  1

  

• Replace anyhow usage with more concrete error handling using thiserror

  databio/gtars#209 · Filter by author donaldcampbelljr opened on Oct 28, 2025
  2

• Putting crates in a subdirectory

  databio/gtars#207 · Filter by author nleroy917 opened on Oct 28, 2025
  2

• Consider backing the RegionSet struct with a polars.DataFrame

  brainstorminghelp wantedquestion
  databio/gtars#206 · Filter by author nleroy917 opened on Oct 28, 2025

• Expand out the gtars-genomicdist functionality

  documentationenhancementlow priority
  databio/gtars#205 · Filter by author nleroy917 opened on Oct 28, 2025

• Consistency with CLI naming and crates/modules

  low priority
  databio/gtars#204 · Filter by author nleroy917 opened on Oct 27, 2025

• Improve the scoring API

  databio/gtars#198 · Filter by author nleroy917 opened on Oct 25, 2025
  1

• Switch panic to custom error in RegionSet bedToBigBed

  databio/gtars#194 · Filter by author khoroshevskyi opened on Oct 23, 2025

• Update regionset creation using AsRef

  good first issue
  databio/gtars#188 · Filter by author khoroshevskyi opened on Oct 23, 2025

• Refactor error handling.

  enhancementgood first issueigduniwig
  databio/gtars#183 · Filter by author donaldcampbelljr opened on Oct 20, 2025
  1

• Think about how we want to distribute the cli binaries

  brainstormingdocumentationenhancement
  databio/gtars#171 · Filter by author nleroy917 opened on Sep 16, 2025

• Potential off-by-one bug in scatrs fragment counting

  buggood first issuelow priorityscatrs
  databio/gtars#164 · Filter by author nleroy917 opened on Sep 9, 2025

• scatrs: difference between fragments.bed and fragments.tsv

  questionscatrs
  databio/gtars#157 · Filter by author nleroy917 opened on Aug 19, 2025

• scatrs configuration confusion

  likely solvedquestionscatrs
  databio/gtars#156 · Filter by author nleroy917 opened on Aug 19, 2025
  4

• Option to output a count matrix with scatrs

  brainstormingenhancementscatrs
  databio/gtars#155 · Filter by author nleroy917 opened on Aug 19, 2025
  1

• uniwig creates core values that are continually increasing on chr1

  buguniwig
  databio/gtars#152 · Filter by author nleroy917 opened on Aug 14, 2025
  5

• Clean up the gtars/tests/data folder

  databio/gtars#134 · Filter by author nsheff opened on Jul 14, 2025
  4

• Stream uniwig counts to npy files

  enhancementlow priorityuniwig
  databio/gtars#125 · Filter by author donaldcampbelljr opened on Jun 3, 2025
  3

• IGD search should take in a query object rather than a bed file path

  enhancementigd
  databio/gtars#114 · Filter by author sanghoonio opened on Apr 8, 2025
  1

• Large number of chromosomes (more than 1000) gives OS Error 24

  uniwig
  databio/gtars#76 · Filter by author donaldcampbelljr opened on Jan 28, 2025

• Should uniwig custom format include reference genome of the input file?

  enhancementquestionuniwig
  databio/gtars#68 · Filter by author donaldcampbelljr opened on Jan 17, 2025
  2