Issue 1144 new continuous integration

.github/workflows/test-aarsethzare.yml

@@ -0,0 +1,79 @@
+name: Test AMUSE aarsethzare
+
+on:
+  push:
+    paths:
+      - .github/workflows/test-aarsethzare.yml
+      - 'src/amuse_aarsethzare/**'
+  pull_request:
+    branches:
+      - main
+    paths:
+      - .github/workflows/test-aarsethzare.yml
+      - 'src/amuse_aarsethzare/**'
+  workflow_dispatch:
+
+jobs:
+  test:
+    runs-on: ${{ matrix.os }}
+
+    strategy:
+      fail-fast: false
+      matrix:
+        os:
+          - ubuntu-latest
+          - macos-latest
+
+    defaults:
+      run:
+        shell: bash -el {0}
+
+    steps:
+    - name: Set up conda
+      uses: conda-incubator/setup-miniconda@v3
+      with:
+        auto-update-conda: true
+        channels: conda-forge
+        channel-priority: strict
+
+    - name: Show conda info
+      run: |
+        conda info
+        conda list
+
+    - name: Install dependencies
+      run: |
+        conda install c-compiler cxx-compiler fortran-compiler 'gfortran<14' python pkgconfig coreutils patch curl tar unzip gzip bzip2 xz perl bison make cmake 'openmpi<5' gsl fftw gmp mpfr hdf5 netcdf4 libopenblas liblapack zlib pip wheel 'docutils>=0.6' 'mpi4py>=1.1.0' 'numpy>=1.2.2' 'h5py>=1.1.0' pytest
+
+    - name: Configure OpenMPI
+      if: ${{ matrix.os == 'ubuntu-latest' }}
+      run: |
+        mkdir -p "$HOME/.openmpi"
+        echo "btl_tcp_if_include = lo" >>"$HOME/.openmpi/mca-params.conf"
+        echo "rmaps_base_oversubscribe = true" >>"$HOME/.openmpi/mca-params.conf"
+
+    - name: Checkout
+      uses: actions/checkout@v4
+      with:
+        fetch-depth: 0
+        fetch-tags: true
+
+    - name: Build aarsethzare
+      run: |
+        ./setup install amuse-aarsethzare
+
+    - name: Ensure we test only the installed package
+      run: |
+        ./setup distclean
+
+    - name: Test aarsethzare
+      run: |
+        ./setup test amuse-aarsethzare
+
+    - name: Archive build logs
+      if: always()
+      uses: actions/upload-artifact@v4
+      with:
+        name: logs-${{ matrix.os }}
+        path: ${{ github.workspace }}/support/logs/
+        if-no-files-found: warn

.github/workflows/test-adaptb.yml

@@ -0,0 +1,79 @@
+name: Test AMUSE adaptb
+
+on:
+  push:
+    paths:
+      - .github/workflows/test-adaptb.yml
+      - 'src/amuse_adaptb/**'
+  pull_request:
+    branches:
+      - main
+    paths:
+      - .github/workflows/test-adaptb.yml
+      - 'src/amuse_adaptb/**'
+  workflow_dispatch:
+
+jobs:
+  test:
+    runs-on: ${{ matrix.os }}
+
+    strategy:
+      fail-fast: false
+      matrix:
+        os:
+          - ubuntu-latest
+          - macos-latest
+
+    defaults:
+      run:
+        shell: bash -el {0}
+
+    steps:
+    - name: Set up conda
+      uses: conda-incubator/setup-miniconda@v3
+      with:
+        auto-update-conda: true
+        channels: conda-forge
+        channel-priority: strict
+
+    - name: Show conda info
+      run: |
+        conda info
+        conda list
+
+    - name: Install dependencies
+      run: |
+        conda install c-compiler cxx-compiler fortran-compiler 'gfortran<14' python pkgconfig coreutils patch curl tar unzip gzip bzip2 xz perl bison make cmake 'openmpi<5' gsl fftw gmp mpfr hdf5 netcdf4 libopenblas liblapack zlib pip wheel 'docutils>=0.6' 'mpi4py>=1.1.0' 'numpy>=1.2.2' 'h5py>=1.1.0' pytest
+
+    - name: Configure OpenMPI
+      if: ${{ matrix.os == 'ubuntu-latest' }}
+      run: |
+        mkdir -p "$HOME/.openmpi"
+        echo "btl_tcp_if_include = lo" >>"$HOME/.openmpi/mca-params.conf"
+        echo "rmaps_base_oversubscribe = true" >>"$HOME/.openmpi/mca-params.conf"
+
+    - name: Checkout
+      uses: actions/checkout@v4
+      with:
+        fetch-depth: 0
+        fetch-tags: true
+
+    - name: Build adaptb
+      run: |
+        ./setup install amuse-adaptb
+
+    - name: Ensure we test only the installed package
+      run: |
+        ./setup distclean
+
+    - name: Test adaptb
+      run: |
+        ./setup test amuse-adaptb
+
+    - name: Archive build logs
+      if: always()
+      uses: actions/upload-artifact@v4
+      with:
+        name: logs-${{ matrix.os }}
+        path: ${{ github.workspace }}/support/logs/
+        if-no-files-found: warn

.github/workflows/test-athena.yml

@@ -0,0 +1,79 @@
+name: Test AMUSE athena
+
+on:
+  push:
+    paths:
+      - .github/workflows/test-athena.yml
+      - 'src/amuse_athena/**'
+  pull_request:
+    branches:
+      - main
+    paths:
+      - .github/workflows/test-athena.yml
+      - 'src/amuse_athena/**'
+  workflow_dispatch:
+
+jobs:
+  test:
+    runs-on: ${{ matrix.os }}
+
+    strategy:
+      fail-fast: false
+      matrix:
+        os:
+          - ubuntu-latest
+          - macos-latest
+
+    defaults:
+      run:
+        shell: bash -el {0}
+
+    steps:
+    - name: Set up conda
+      uses: conda-incubator/setup-miniconda@v3
+      with:
+        auto-update-conda: true
+        channels: conda-forge
+        channel-priority: strict
+
+    - name: Show conda info
+      run: |
+        conda info
+        conda list
+
+    - name: Install dependencies
+      run: |
+        conda install c-compiler cxx-compiler fortran-compiler 'gfortran<14' python pkgconfig coreutils patch curl tar unzip gzip bzip2 xz perl bison make cmake 'openmpi<5' gsl fftw gmp mpfr hdf5 netcdf4 libopenblas liblapack zlib pip wheel 'docutils>=0.6' 'mpi4py>=1.1.0' 'numpy>=1.2.2' 'h5py>=1.1.0' pytest
+
+    - name: Configure OpenMPI
+      if: ${{ matrix.os == 'ubuntu-latest' }}
+      run: |
+        mkdir -p "$HOME/.openmpi"
+        echo "btl_tcp_if_include = lo" >>"$HOME/.openmpi/mca-params.conf"
+        echo "rmaps_base_oversubscribe = true" >>"$HOME/.openmpi/mca-params.conf"
+
+    - name: Checkout
+      uses: actions/checkout@v4
+      with:
+        fetch-depth: 0
+        fetch-tags: true
+
+    - name: Build athena
+      run: |
+        ./setup install amuse-athena
+
+    - name: Ensure we test only the installed package
+      run: |
+        ./setup distclean
+
+    - name: Test athena
+      run: |
+        ./setup test amuse-athena
+
+    - name: Archive build logs
+      if: always()
+      uses: actions/upload-artifact@v4
+      with:
+        name: logs-${{ matrix.os }}
+        path: ${{ github.workspace }}/support/logs/
+        if-no-files-found: warn

.github/workflows/test-bhtree.yml

@@ -0,0 +1,79 @@
+name: Test AMUSE bhtree
+
+on:
+  push:
+    paths:
+      - .github/workflows/test-bhtree.yml
+      - 'src/amuse_bhtree/**'
+  pull_request:
+    branches:
+      - main
+    paths:
+      - .github/workflows/test-bhtree.yml
+      - 'src/amuse_bhtree/**'
+  workflow_dispatch:
+
+jobs:
+  test:
+    runs-on: ${{ matrix.os }}
+
+    strategy:
+      fail-fast: false
+      matrix:
+        os:
+          - ubuntu-latest
+          - macos-latest
+
+    defaults:
+      run:
+        shell: bash -el {0}
+
+    steps:
+    - name: Set up conda
+      uses: conda-incubator/setup-miniconda@v3
+      with:
+        auto-update-conda: true
+        channels: conda-forge
+        channel-priority: strict
+
+    - name: Show conda info
+      run: |
+        conda info
+        conda list
+
+    - name: Install dependencies
+      run: |
+        conda install c-compiler cxx-compiler fortran-compiler 'gfortran<14' python pkgconfig coreutils patch curl tar unzip gzip bzip2 xz perl bison make cmake 'openmpi<5' gsl fftw gmp mpfr hdf5 netcdf4 libopenblas liblapack zlib pip wheel 'docutils>=0.6' 'mpi4py>=1.1.0' 'numpy>=1.2.2' 'h5py>=1.1.0' pytest
+
+    - name: Configure OpenMPI
+      if: ${{ matrix.os == 'ubuntu-latest' }}
+      run: |
+        mkdir -p "$HOME/.openmpi"
+        echo "btl_tcp_if_include = lo" >>"$HOME/.openmpi/mca-params.conf"
+        echo "rmaps_base_oversubscribe = true" >>"$HOME/.openmpi/mca-params.conf"
+
+    - name: Checkout
+      uses: actions/checkout@v4
+      with:
+        fetch-depth: 0
+        fetch-tags: true
+
+    - name: Build bhtree
+      run: |
+        ./setup install amuse-bhtree
+
+    - name: Ensure we test only the installed package
+      run: |
+        ./setup distclean
+
+    - name: Test bhtree
+      run: |
+        ./setup test amuse-bhtree
+
+    - name: Archive build logs
+      if: always()
+      uses: actions/upload-artifact@v4
+      with:
+        name: logs-${{ matrix.os }}
+        path: ${{ github.workspace }}/support/logs/
+        if-no-files-found: warn

.github/workflows/test-brutus.yml

@@ -0,0 +1,79 @@
+name: Test AMUSE brutus
+
+on:
+  push:
+    paths:
+      - .github/workflows/test-brutus.yml
+      - 'src/amuse_brutus/**'
+  pull_request:
+    branches:
+      - main
+    paths:
+      - .github/workflows/test-brutus.yml
+      - 'src/amuse_brutus/**'
+  workflow_dispatch:
+
+jobs:
+  test:
+    runs-on: ${{ matrix.os }}
+
+    strategy:
+      fail-fast: false
+      matrix:
+        os:
+          - ubuntu-latest
+          - macos-latest
+
+    defaults:
+      run:
+        shell: bash -el {0}
+
+    steps:
+    - name: Set up conda
+      uses: conda-incubator/setup-miniconda@v3
+      with:
+        auto-update-conda: true
+        channels: conda-forge
+        channel-priority: strict
+
+    - name: Show conda info
+      run: |
+        conda info
+        conda list
+
+    - name: Install dependencies
+      run: |
+        conda install c-compiler cxx-compiler fortran-compiler 'gfortran<14' python pkgconfig coreutils patch curl tar unzip gzip bzip2 xz perl bison make cmake 'openmpi<5' gsl fftw gmp mpfr hdf5 netcdf4 libopenblas liblapack zlib pip wheel 'docutils>=0.6' 'mpi4py>=1.1.0' 'numpy>=1.2.2' 'h5py>=1.1.0' pytest
+
+    - name: Configure OpenMPI
+      if: ${{ matrix.os == 'ubuntu-latest' }}
+      run: |
+        mkdir -p "$HOME/.openmpi"
+        echo "btl_tcp_if_include = lo" >>"$HOME/.openmpi/mca-params.conf"
+        echo "rmaps_base_oversubscribe = true" >>"$HOME/.openmpi/mca-params.conf"
+
+    - name: Checkout
+      uses: actions/checkout@v4
+      with:
+        fetch-depth: 0
+        fetch-tags: true
+
+    - name: Build brutus
+      run: |
+        ./setup install amuse-brutus
+
+    - name: Ensure we test only the installed package
+      run: |
+        ./setup distclean
+
+    - name: Test brutus
+      run: |
+        ./setup test amuse-brutus
+
+    - name: Archive build logs
+      if: always()
+      uses: actions/upload-artifact@v4
+      with:
+        name: logs-${{ matrix.os }}
+        path: ${{ github.workspace }}/support/logs/
+        if-no-files-found: warn