R3BRootGroup · jose-luis-rs · Jun 2, 2026 · Jun 2, 2026
diff --git a/.github/actions/fsr/cache-save/action.yml b/.github/actions/fsr/cache-save/action.yml
@@ -0,0 +1,31 @@
+name: cache-save
+description: 'steps to cache R3BRoot and ucesb'
+
+inputs:
+  r3b-dev-key:
+    description: 'key for r3b dev cache'
+    required: false
+    default: ''
+  cache-name:
+    description: 'repository name'
+    required: true
+
+runs:
+  using: composite
+  steps:
+    - name: cache ucesb
+      id: cache-ucesb
+      uses: actions/cache/save@v5
+      with:
+        path: |
+          ${{ env.UCESB_DIR }}
+          ${{ github.workspace }}/build/_deps
+        key: build-deps
+
+    - name: cache r3b
+      if: matrix.save != 'false'
+      id: cache-r3b
+      uses: actions/cache/save@v5
+      with:
+        path: .ccache
+        key: r3b-build-${{ inputs.cache-name }}-${{ inputs.r3b-dev-key }}
diff --git a/.github/actions/fsr/ctest-cdash/action.yml b/.github/actions/fsr/ctest-cdash/action.yml
@@ -0,0 +1,37 @@
+name: ctest-cdash
+description: 'steps to perform ctest and submit the report to cdash'
+
+inputs:
+  repo:
+    description: 'repository name'
+    required: true
+
+runs:
+  using: composite
+  steps:
+    - name: set env variables for push
+      if: github.event_name == 'push'
+      run: |
+        echo "TEST_MODEL=Continuous" >> $GITHUB_ENV
+        echo "TEST_NAME=\"${{ inputs.repo }} (commit ${cacheSHA})\"" >> $GITHUB_ENV
+      shell: bash
+
+    - name: set env variables for pull request
+      if: github.event_name != 'push'
+      run: |
+        echo "TEST_MODEL=Experimental" >> $GITHUB_ENV
+        export PULL_NR=${{ github.event.number }}
+        echo "TEST_NAME=\"${{ inputs.repo }}_${{ matrix.sys }} (pull request No.${PULL_NR})\"" >> $GITHUB_ENV
+      shell: bash
+
+    - name: running ctest
+      run: |
+        source $GITHUB_WORKSPACE/util/generate_geo_test.sh
+        echo "Running ctest on ${{ matrix.sys }} "
+        ctest -S cmake/CI_CD/CDash.cmake -DBUILD_J=${NUM_THREADS}\
+              -DTEST_MODEL=${TEST_MODEL}\
+              -DTEST_NAME=${{ env.TEST_NAME }}\
+              -DSITE_NAME="Github hosted (${{ github.repository }})"\
+              --force-new-ctest-process \
+              -V -E "(run_gen_sim|run_digi|run_aladin_digi|califasim2|landreco|elsim)"   
+      shell: bash
diff --git a/.github/actions/fsr/install-deps/action.yml b/.github/actions/fsr/install-deps/action.yml
@@ -0,0 +1,44 @@
+name: install-deps
+description: 'steps to install deps'
+
+inputs:
+  r3b-dev-key:
+    description: 'key for r3b dev cache'
+    required: false
+    default: ''
+  cache-name:
+    description: 'repository name'
+    required: false
+    default: 'false'
+
+runs:
+  using: composite
+  steps:
+    - name: cache ucesb
+      if: github.event_name == 'pull_request'
+      id: cache-ucesb
+      uses: actions/cache/restore@v5
+      with:
+        path: |
+          ${{ env.UCESB_DIR }}
+          ${{ github.workspace }}/build/_deps
+        key: build-deps
+
+    - name: cache r3b
+      if: inputs.cache-name != 'false' && github.event_name == 'pull_request'
+      id: cache-r3b
+      uses: actions/cache/restore@v5
+      with:
+        path: .ccache
+        key: r3b-build-${{ inputs.cache-name }}-${{ inputs.r3b-dev-key }}
+        restore-keys: |
+          r3b-build-${{ inputs.cache-name }}-
+          r3b-build-
+
+    - name: build ucesb
+      if: steps.cache-ucesb.outputs.cache-hit != 'true'
+      run: |
+        export LD_LIBRARY_PATH="${SIMPATH}/lib/:${LD_LIBRARY_PATH}"
+        git clone https://git.chalmers.se/expsubphys/ucesb.git
+        cd ucesb && make -j${NUM_THREADS} empty/empty
+      shell: bash
diff --git a/.github/actions/fsr/pre-build/action.yml b/.github/actions/fsr/pre-build/action.yml
@@ -0,0 +1,31 @@
+name: pre build
+description: 'steps before building R3BRoot with Sofia'
+
+runs:
+  using: composite
+  steps:
+    - name: set env variables
+      run: |
+        git config --global --add safe.directory $GITHUB_WORKSPACE
+        echo "UCESB_DIR=$GITHUB_WORKSPACE/ucesb/" >> $GITHUB_ENV
+        export SIMPATH=$FAIRSOFTPATH
+        echo "SIMPATH=${SIMPATH}" >> $GITHUB_ENV
+        echo "FAIRROOTPATH=$FAIRROOTPATH" >> $GITHUB_ENV
+        echo "${SIMPATH}/bin" >> $GITHUB_PATH           
+        # variables for ccache
+        echo "CCACHE_BASEDIR=${GITHUB_WORKSPACE}" >> $GITHUB_ENV
+        echo "CCACHE_DIR=${GITHUB_WORKSPACE}/.ccache" >> $GITHUB_ENV
+        echo "CCACHE_COMPRESS=true" >> $GITHUB_ENV
+        echo "CCACHE_COMPRESSLEVEL=6" >> $GITHUB_ENV
+        echo "SOURCEDIR=$GITHUB_WORKSPACE" >> $GITHUB_ENV
+        echo "BUILDDIR=$GITHUB_WORKSPACE/build" >> $GITHUB_ENV
+        echo "cacheSHA=$([[ ${{github.event_name}} = "push" ]] && git rev-parse --short HEAD || git rev-parse --short HEAD^)" >> $GITHUB_ENV
+      shell: bash
+
+    - name: update system
+      run: |    
+        apt-get update
+        apt-get install --fix-missing -y sudo wget gnupg lsb-release
+        mkdir -p ${UCESB_DIR}
+        mkdir -p ${CCACHE_DIR}
+      shell: bash
diff --git a/.github/actions/fsr/r3bbuild-steps/action.yml b/.github/actions/fsr/r3bbuild-steps/action.yml
@@ -0,0 +1,48 @@
+name: build-steps
+description: 'steps to build R3BRoot and ucesb'
+
+
+inputs:
+  build-needed:
+    description: 'build process is needed'
+    required: false
+    default: 'true'
+
+runs:
+  using: composite
+  steps:
+    - if: ${{ matrix.url }}
+      name: add other repos
+      run: |
+        cd $GITHUB_WORKSPACE
+        for url in ${{ matrix.url }};
+        do
+          git clone -b dev ${url}
+        done
+      shell: bash
+
+    - name: cmake config ${{ matrix.repos }}
+      run: |
+        git config --global --add safe.directory $GITHUB_WORKSPACE
+        git submodule update --init --recursive
+        git clone https://github.com/R3BRootGroup/R3BRoot.git
+        cd ..
+        mv sofia/R3BRoot .
+        mv sofia R3BRoot
+        mv R3BRoot sofia
+        cd sofia
+        git clone https://github.com/R3BRootGroup/R3BFileSource.git
+        mv sofia/ucesb .
+        export UCESB_DIR=$GITHUB_WORKSPACE/ucesb/
+        echo "UCESB_DIR=$GITHUB_WORKSPACE/ucesb/" >> $GITHUB_ENV
+        echo ""
+        echo "path environment variable: $PATH\n"
+        echo ""
+        cmake --preset ${{ matrix.preset }} . -C "$GITHUB_WORKSPACE/cmake/CI_CD/configure_options.cmake"
+      shell: bash
+
+    - name: build ${{ matrix.repos }}
+      if: inputs.build-needed == 'true'
+      run: |
+        cmake --build ./build -- -j ${NUM_THREADS}
+      shell: bash
diff --git a/.github/actions/pre-build/action.yml b/.github/actions/pre-build/action.yml
@@ -7,6 +7,9 @@ runs:
     - name: set env variables
       run: |
         git config --global --add safe.directory $GITHUB_WORKSPACE
+        echo "UCESB_DIR=$GITHUB_WORKSPACE/ucesb/" >> $GITHUB_ENV
+        echo "ATIMA_DIR=$GITHUB_WORKSPACE/catima/" >> $GITHUB_ENV
+        echo "ATIMAPATH=$GITHUB_WORKSPACE/catima/install/" >> $GITHUB_ENV
         if [ "${{ matrix.cpp }}" == "20" ]; then
           export SIMPATH=${CVMDIR}/${{ matrix.os }}/fairsoft/cpp20/${{ matrix.fsv }}
           echo "SIMPATH=${SIMPATH}" >> $GITHUB_ENV
@@ -39,12 +42,15 @@ runs:
       run: |    
         apt-get update
         apt-get install --fix-missing -y sudo wget gnupg lsb-release
+        sudo -H pip3 install --ignore-installed -U conan
         wget https://cernbox.cern.ch/remote.php/dav/public-files/RmnTeeOZpYjCJQb/masterkey.gsi.de.pub
         mkdir -p /etc/cvmfs/keys
         mv masterkey.gsi.de.pub /etc/cvmfs/keys
         cp .github/config/fairsoft.gsi.de.conf /etc/cvmfs/config.d
         echo "CVMFS_USER=$(whoami)" >> /etc/cvmfs/config.d/fairsoft.gsi.de.conf
         mkdir -p ${CVMDIR}
         mount -t cvmfs fairsoft.gsi.de ${CVMDIR}
+        mkdir -p ${UCESB_DIR}
+        mkdir -p ${ATIMA_DIR}
         mkdir -p ${CCACHE_DIR}
       shell: bash
diff --git a/.github/actions/r3bbuild-steps/action.yml b/.github/actions/r3bbuild-steps/action.yml
@@ -0,0 +1,48 @@
+name: build-steps
+description: 'steps to build R3BRoot and ucesb'
+
+
+inputs:
+  build-needed:
+    description: 'build process is needed'
+    required: false
+    default: 'true'
+
+runs:
+  using: composite
+  steps:
+    - if: ${{ matrix.url }}
+      name: add other repos
+      run: |
+        cd $GITHUB_WORKSPACE
+        for url in ${{ matrix.url }};
+        do
+          git clone -b dev ${url}
+        done
+      shell: bash
+
+    - name: cmake config ${{ matrix.repos }}
+      run: |
+        git config --global --add safe.directory $GITHUB_WORKSPACE
+        git submodule update --init --recursive
+        git clone https://github.com/R3BRootGroup/R3BRoot.git
+        cd ..
+        mv sofia/R3BRoot .
+        mv sofia R3BRoot
+        mv R3BRoot sofia
+        cd sofia
+        git clone https://github.com/R3BRootGroup/R3BFileSource.git
+        mv sofia/ucesb .
+        export UCESB_DIR=$GITHUB_WORKSPACE/ucesb/
+        echo "UCESB_DIR=$GITHUB_WORKSPACE/ucesb/" >> $GITHUB_ENV
+        echo ""
+        echo "path environment variable: $PATH\n"
+        echo ""
+        cmake --preset ${{ matrix.preset }} . -C "$GITHUB_WORKSPACE/cmake/CI_CD/configure_options.cmake"
+      shell: bash
+
+    - name: build ${{ matrix.repos }}
+      if: inputs.build-needed == 'true'
+      run: |
+        cmake --build ./build -- -j ${NUM_THREADS}
+      shell: bash
diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
@@ -3,7 +3,7 @@
 #   Copyright (C) 2019 University of Santiago de Compostela                  #
 #   Copyright (C) 2019 CEA-DAM-DIF, Université Paris-Saclay                  #
 #   Copyright (C) 2023 University of Coruña                                  #
-#   Copyright (C) 2019-2025 Members of R3B Collaboration                     #
+#   Copyright (C) 2019-2026 Members of R3B Collaboration                     #
 #                                                                            #
 #             This software is distributed under the terms of the            #
 #                 GNU General Public Licence (GPL) version 3,                #
@@ -113,21 +113,7 @@ jobs:
       # A self-defined composite action for the cmake configuration and build
       # of r3broot (along with necessary dep repos).
       - name: Configure-build-sofia
-        run: |
-          git clone https://github.com/R3BRootGroup/R3BRoot.git
-          cd ..
-          mv sofia/R3BRoot .
-          mv sofia R3BRoot
-          mv R3BRoot sofia
-          cd sofia
-          git clone https://github.com/R3BRootGroup/macros.git
-          git clone https://github.com/R3BRootGroup/R3BFileSource.git
-          mv sofia/ucesb .
-          export UCESB_DIR=$GITHUB_WORKSPACE/ucesb/
-          echo "UCESB_DIR=$GITHUB_WORKSPACE/ucesb/" >> $GITHUB_ENV
-          cmake --preset ${{ matrix.preset }} . -B build -C cmake/CI_CD/configure_options.cmake -DCMAKE_CXX_STANDARD=${{ matrix.cpp }}
-          cd build
-          make -j${NUM_THREADS}
+        uses: './.github/actions/r3bbuild-steps'
 
       # A self-defined composite action to perform the ctest and push the
       # results to the cdash (cmake-dashborad). To fully show the errors and