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Single-Cell Multiomics in Danio rerio Embryonic Development

This repository contains the code and resources used in the analysis of single-cell multiomic (scRNA-seq + scATAC-seq) data from Danio rerio (zebrafish) embryos collected at three developmental stages: day 2, day 4, and day 6 post-fertilization. The project applies the SCENIC+ framework to reconstruct transcriptional regulatory networks and identify cell-type-specific regulons across early development.


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This repository contains the analysis of single cell multiomics of Danio rerio

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