Update dependencies to sync better with Particle

Hi @henryiii, I noticed that the dependencies in particular here in the `modeling` submodule,
```
modeling = [
    "numpy>=1.21.6",
    "pandas>=2.0",
    "plumbum>=1.7.0",
]
```
and in relation to the dependencies in Particle, aren't quite in sync as they could be. We should tune the dependencies a little bit. Let me know if you agree, especially in relation to the `modeling` submodule.