Inserted by Kasper request
see: https://support.bioconductor.org/p/70492/
.....................
Issue:
When trying to plot more than one edge between two nodes with distinct labels, the Rgraphviz uses only the first informed label to all these edges, ignoring the following labels. You can replicate this using the simple example that follows:
g <- new( "graphNEL", nodes= c("a","b"), edgemode="directed", edgeL= list( a = c("b", "b","b" ), b=c()) )
plot( g, main="test", edgeAttrs= list( label = c("ab"="Y-label", "ab"="Z-label", "a~b"="")), attrs=list(graph=list(rankdir="LR")) )
Current environment (another researcher observed the same issue under a windows 7 environment) - sessionInfo() output:
R version 3.1.1 (2014-07-10)
Platform: x86_64-suse-linux-gnu (64-bit)
locale:
[1] LC_CTYPE=pt_BR.UTF-8 LC_NUMERIC=C
[3] LC_TIME=pt_BR.UTF-8 LC_COLLATE=pt_BR.UTF-8
[5] LC_MONETARY=pt_BR.UTF-8 LC_MESSAGES=pt_BR.UTF-8
[7] LC_PAPER=pt_BR.UTF-8 LC_NAME=pt_BR.UTF-8
[9] LC_ADDRESS=pt_BR.UTF-8 LC_TELEPHONE=pt_BR.UTF-8
[11] LC_MEASUREMENT=pt_BR.UTF-8 LC_IDENTIFICATION=pt_BR.UTF-8
attached base packages:
[1] grid stats graphics grDevices utils datasets methods
[8] base
other attached packages:
[1] Rgraphviz_2.10.0 graph_1.44.1 rkward_0.6.1
loaded via a namespace (and not attached):
[1] BiocGenerics_0.12.1 parallel_3.1.1 stats4_3.1.1
[4] tools_3.1.1
Pier-Giovanni Taranti (ptaranti@gmail.com)
CASNAV, Rio de Janeiro, Brazil
Inserted by Kasper request
see: https://support.bioconductor.org/p/70492/
.....................
Issue:
When trying to plot more than one edge between two nodes with distinct labels, the Rgraphviz uses only the first informed label to all these edges, ignoring the following labels. You can replicate this using the simple example that follows:
g <- new( "graphNEL", nodes= c("a","b"), edgemode="directed", edgeL= list( a = c("b", "b","b" ), b=c()) )
plot( g, main="test", edgeAttrs= list( label = c("a
b"="Y-label", "ab"="Z-label", "a~b"="")), attrs=list(graph=list(rankdir="LR")) )Current environment (another researcher observed the same issue under a windows 7 environment) - sessionInfo() output:
R version 3.1.1 (2014-07-10)
Platform: x86_64-suse-linux-gnu (64-bit)
locale:
[1] LC_CTYPE=pt_BR.UTF-8 LC_NUMERIC=C
[3] LC_TIME=pt_BR.UTF-8 LC_COLLATE=pt_BR.UTF-8
[5] LC_MONETARY=pt_BR.UTF-8 LC_MESSAGES=pt_BR.UTF-8
[7] LC_PAPER=pt_BR.UTF-8 LC_NAME=pt_BR.UTF-8
[9] LC_ADDRESS=pt_BR.UTF-8 LC_TELEPHONE=pt_BR.UTF-8
[11] LC_MEASUREMENT=pt_BR.UTF-8 LC_IDENTIFICATION=pt_BR.UTF-8
attached base packages:
[1] grid stats graphics grDevices utils datasets methods
[8] base
other attached packages:
[1] Rgraphviz_2.10.0 graph_1.44.1 rkward_0.6.1
loaded via a namespace (and not attached):
[1] BiocGenerics_0.12.1 parallel_3.1.1 stats4_3.1.1
[4] tools_3.1.1
Pier-Giovanni Taranti (ptaranti@gmail.com)
CASNAV, Rio de Janeiro, Brazil