Issues

• Bulk metadata export or keyset pagination for /v1/bed/list: deep offsets time out, and our crawl likely caused the 2026-09-18 outage

  databio/bedhost#287 · Filter by author seandavi opened on Sep 18, 2026
  1

• Develop a better way of retrieving data from refgenie

  enhancement
  databio/bedhost#267 · Filter by author khoroshevskyi opened on Apr 16, 2026

• UMAP joblib file - File size

  dependencies
  databio/bedhost#266 · Filter by author khoroshevskyi opened on Apr 16, 2026

• Examples of GEO incorrect data [keep open]

  databio/bedhost#254 · Filter by author khoroshevskyi opened on Feb 1, 2026

• Updated zarr version to 3.0

  enhancementpriority-low
  databio/bedhost#243 · Filter by author khoroshevskyi opened on Dec 17, 2025
  1

• Add a page with the most recent files added to BEDbase

  priority-low
  databio/bedhost#225 · Filter by author khoroshevskyi opened on Sep 30, 2025
  1

• Improve SQL pagination

  databio/bedhost#210 · Filter by author khoroshevskyi opened on Jul 1, 2025

• Modular plotting endpoints

  databio/bedhost#185 · Filter by author sanghoonio opened on Apr 29, 2025

• Visualising bedfiles in Genome browser

  brainstorming
  databio/bedhost#151 · Filter by author khoroshevskyi opened on Nov 12, 2024

• Storing tokenized single cells

  enhancement
  databio/bedhost#119 · Filter by author nleroy917 opened on May 28, 2024

• Bedhost: the user defined BED set download endpoint enhancement

  enhancementpriority-low
  databio/bedhost#87 · Filter by author xuebingjie1990 opened on Feb 1, 2023
  1